STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cplx4Complexin 4a. (159 aa)    
Predicted Functional Partners:
pdc
Phosducin b.
   
    0.842
LOC100706574
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
  
 0.663
LOC100699687
Internexin neuronal intermediate filament protein, alpha b; Belongs to the intermediate filament family.
   
  
 0.588
mapk4
Mitogen-activated protein kinase 4.
    
 
 0.495
LOC100699795
Phosducin domain-containing protein.
   
    0.491
RIMS2
Regulating synaptic membrane exocytosis 2.
      
 0.485
I3KDW2_ORENI
Uncharacterized protein.
      
 0.485
guca1b
Guanylate cyclase activator 1B.
   
  
 0.465
LOC100708666
Syntaphilin.
      
 0.465
emp2
Epithelial membrane protein 2.
      
 0.442
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.