STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100693455Cholinergic receptor, nicotinic, alpha 9. (553 aa)    
Predicted Functional Partners:
LOC100691234
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.632
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.631
LOC100696880
Uncharacterized protein.
  
0.463
LOC100699483
Uncharacterized protein.
  
0.463
LOC100691116
Cholinergic receptor, nicotinic, alpha 7 (neuronal).
  
0.461
LOC100705513
Uncharacterized protein.
   
0.446
I3JWT4_ORENI
Uncharacterized protein.
   
0.446
LOC100696293
Si:ch211-39a7.1.
   
0.446
lenep
Lens epithelial cell protein LEP503.
      
 0.432
ulk4
Unc-51 like kinase 4.
      
 0.426
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.