STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100699176RAR-related orphan receptor C b. (499 aa)    
Predicted Functional Partners:
ncor2
Nuclear receptor corepressor 2.
    
 0.597
ncor1
Nuclear receptor corepressor 1.
    
 0.597
nrip1
Nuclear receptor interacting protein 1b.
    
 0.594
I3KES1_ORENI
Uncharacterized protein.
    
 0.508
I3JAR8_ORENI
Uncharacterized protein.
    
 0.508
I3KB63_ORENI
Link domain-containing protein.
      
 0.444
LOC100703460
Clock circadian regulator b.
   
 0.419
CLOCK
Clock circadian regulator a.
   
 0.419
ncoa2
Nuclear receptor coactivator 2.
    
 0.418
LOC100698057
Nuclear receptor coactivator.
    
 0.418
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.