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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panx2Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family. (660 aa)    
Predicted Functional Partners:
panx1
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
     
0.726
LOC100709643
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
     
0.676
Tbr1
T-box brain transcription factor 1b.
      
 0.662
hoxc6
Homeobox C6a.
      
 0.598
ripk4
Receptor-interacting serine-threonine kinase 4.
      
 0.597
Svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
      
 0.584
pomgnt2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.579
plagl2
Pleiomorphic adenoma gene-like 2.
      
 0.563
Egr3
Early growth response 3.
      
 0.553
ptchd1
Patched domain containing 1.
      
 0.524
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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