STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glceGlucuronic acid epimerase b. (595 aa)    
Predicted Functional Partners:
LOC100695867
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.
   
 0.947
LOC100692215
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X1.
   
 0.947
I3K5L7_ORENI
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a.
   
 0.947
LOC100699683
Syndecan-2.
    
 0.637
extl3
Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
      
 0.585
slc35b3
Solute carrier family 35 member B3.
      
 0.581
hs2st1
Heparan sulfate 2-O-sulfotransferase 1a.
   
 
 0.580
LOC100712187
Heparan sulfate 2-O-sulfotransferase 1b.
   
 
 0.580
b4galt7
Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I).
      
 0.579
LOC100707002
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
    
 
 0.494
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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