Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ddx18 | gnl2 | ENSONIP00000009943 | ENSONIP00000020509 | RNA helicase. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.990 |
ddx18 | gnl3 | ENSONIP00000009943 | ENSONIP00000024337 | RNA helicase. | Guanine nucleotide binding protein-like 3 (nucleolar). | 0.984 |
ddx18 | gnl3l | ENSONIP00000009943 | ENSONIP00000075317 | RNA helicase. | Guanine nucleotide-binding protein-like 3-like protein isoform X2. | 0.984 |
ddx18 | gtpbp4 | ENSONIP00000009943 | ENSONIP00000022327 | RNA helicase. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.998 |
ddx18 | nop53 | ENSONIP00000009943 | ENSONIP00000020940 | RNA helicase. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.688 |
ddx18 | nsa2 | ENSONIP00000009943 | ENSONIP00000028063 | RNA helicase. | NSA2 ribosome biogenesis homolog (S. cerevisiae). | 0.993 |
ddx18 | pes1 | ENSONIP00000009943 | ENSONIP00000050119 | RNA helicase. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
ddx18 | rpf2 | ENSONIP00000009943 | ENSONIP00000053094 | RNA helicase. | Ribosome production factor 2 homolog. | 0.993 |
ddx18 | rsl24d1 | ENSONIP00000009943 | ENSONIP00000062548 | RNA helicase. | Ribosomal L24 domain containing 1. | 0.977 |
ddx18 | znf593 | ENSONIP00000009943 | ENSONIP00000004494 | RNA helicase. | Zinc finger protein 593. | 0.559 |
gnl2 | ddx18 | ENSONIP00000020509 | ENSONIP00000009943 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | RNA helicase. | 0.990 |
gnl2 | gnl3 | ENSONIP00000020509 | ENSONIP00000024337 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Guanine nucleotide binding protein-like 3 (nucleolar). | 0.997 |
gnl2 | gnl3l | ENSONIP00000020509 | ENSONIP00000075317 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Guanine nucleotide-binding protein-like 3-like protein isoform X2. | 0.997 |
gnl2 | gtpbp4 | ENSONIP00000020509 | ENSONIP00000022327 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
gnl2 | nop53 | ENSONIP00000020509 | ENSONIP00000020940 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.997 |
gnl2 | nsa2 | ENSONIP00000020509 | ENSONIP00000028063 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | NSA2 ribosome biogenesis homolog (S. cerevisiae). | 0.998 |
gnl2 | pes1 | ENSONIP00000020509 | ENSONIP00000050119 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
gnl2 | rpf2 | ENSONIP00000020509 | ENSONIP00000053094 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosome production factor 2 homolog. | 0.996 |
gnl2 | rsl24d1 | ENSONIP00000020509 | ENSONIP00000062548 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosomal L24 domain containing 1. | 0.997 |
gnl2 | znf593 | ENSONIP00000020509 | ENSONIP00000004494 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Zinc finger protein 593. | 0.992 |
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