STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3KQY8_ORENISi:ch211-195d17.2. (401 aa)    
Predicted Functional Partners:
tfdp1
Transcription factor.
   
 0.929
I3KUJ9_ORENI
L3MBTL histone methyl-lysine binding protein 2.
    
 0.908
pcgf1
Polycomb group ring finger 1.
    
 0.886
pcgf6
Polycomb group RING finger protein 6.
    
 0.886
RING1
RING-type domain-containing protein.
    
 0.885
rnf2
Ring finger protein 2.
    
 0.885
rybp
RING1 and YY1 binding protein b.
   
 0.859
I3JS36_ORENI
FCS-type domain-containing protein.
    
 0.855
LOC100696505
Mbt domain containing 1.
    
 0.855
I3JQ01_ORENI
YY1 associated factor 2.
   
 0.823
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.