STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
otcOrnithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (371 aa)    
Predicted Functional Partners:
ASS1
Argininosuccinate synthase 1.
 
 
 0.999
cps1
Carbamoyl-phosphate synthase 1, mitochondrial.
 
 
 0.999
arg2
Arginase.
   
 0.989
LOC100706482
Arginase.
   
 0.989
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
  
 
 0.988
oat
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.986
cad
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
   
0.984
asl
Argininosuccinate lyase.
  
 0.971
acy1
Aminoacylase 1.
    
 0.969
nags
N-acetylglutamate synthase.
  
 
 0.954
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.