ENSONIP00000070346 protein (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSONIP00000070346

annotation not available (328 aa)

Predicted Functional Partners:

ash2l

0.584

rbbp5

0.570

eed

0.513

mphosph8

0.464

suz12

0.418

LOC100701898

0.418

I3K2A8_ORENI

0.401

Kdm6b

0.401

I3KVD8_ORENI

0.401

LOC100699848

0.401

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000070346	I3K2A8_ORENI	ENSONIP00000070346	ENSONIP00000015253	annotation not available	Lysine (K)-specific demethylase 6A, like.	0.401
ENSONIP00000070346	I3KVD8_ORENI	ENSONIP00000070346	ENSONIP00000030895	annotation not available	Lysine (K)-specific demethylase 6B, a.	0.401
ENSONIP00000070346	Kdm6b	ENSONIP00000070346	ENSONIP00000025084	annotation not available	Lysine-specific demethylase 6B.	0.401
ENSONIP00000070346	LOC100699848	ENSONIP00000070346	ENSONIP00000042412	annotation not available	Lysine (K)-specific demethylase 6B, b.	0.401
ENSONIP00000070346	LOC100701898	ENSONIP00000070346	ENSONIP00000030096	annotation not available	VEFS-Box domain-containing protein.	0.418
ENSONIP00000070346	ash2l	ENSONIP00000070346	ENSONIP00000014499	annotation not available	Ash2 like, histone lysine methyltransferase complex subunit.	0.584
ENSONIP00000070346	eed	ENSONIP00000070346	ENSONIP00000008996	annotation not available	Embryonic ectoderm development.	0.513
ENSONIP00000070346	mphosph8	ENSONIP00000070346	ENSONIP00000019804	annotation not available	M-phase phosphoprotein 8.	0.464
ENSONIP00000070346	rbbp5	ENSONIP00000070346	ENSONIP00000000597	annotation not available	Retinoblastoma binding protein 5.	0.570
ENSONIP00000070346	suz12	ENSONIP00000070346	ENSONIP00000022798	annotation not available	SUZ12 polycomb repressive complex 2 subunit b.	0.418
I3K2A8_ORENI	ENSONIP00000070346	ENSONIP00000015253	ENSONIP00000070346	Lysine (K)-specific demethylase 6A, like.	annotation not available	0.401
I3K2A8_ORENI	Kdm6b	ENSONIP00000015253	ENSONIP00000025084	Lysine (K)-specific demethylase 6A, like.	Lysine-specific demethylase 6B.	0.471
I3K2A8_ORENI	LOC100701898	ENSONIP00000015253	ENSONIP00000030096	Lysine (K)-specific demethylase 6A, like.	VEFS-Box domain-containing protein.	0.830
I3K2A8_ORENI	ash2l	ENSONIP00000015253	ENSONIP00000014499	Lysine (K)-specific demethylase 6A, like.	Ash2 like, histone lysine methyltransferase complex subunit.	0.955
I3K2A8_ORENI	eed	ENSONIP00000015253	ENSONIP00000008996	Lysine (K)-specific demethylase 6A, like.	Embryonic ectoderm development.	0.894
I3K2A8_ORENI	rbbp5	ENSONIP00000015253	ENSONIP00000000597	Lysine (K)-specific demethylase 6A, like.	Retinoblastoma binding protein 5.	0.958
I3K2A8_ORENI	suz12	ENSONIP00000015253	ENSONIP00000022798	Lysine (K)-specific demethylase 6A, like.	SUZ12 polycomb repressive complex 2 subunit b.	0.830
I3KVD8_ORENI	ENSONIP00000070346	ENSONIP00000030895	ENSONIP00000070346	Lysine (K)-specific demethylase 6B, a.	annotation not available	0.401
I3KVD8_ORENI	Kdm6b	ENSONIP00000030895	ENSONIP00000025084	Lysine (K)-specific demethylase 6B, a.	Lysine-specific demethylase 6B.	0.921
I3KVD8_ORENI	LOC100701898	ENSONIP00000030895	ENSONIP00000030096	Lysine (K)-specific demethylase 6B, a.	VEFS-Box domain-containing protein.	0.827