STRINGSTRING
appB protein (Chlamydia trachomatis) - STRING interaction network
"appB" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
appBannotation not available (353 aa)    
Predicted Functional Partners:
cydA
annotation not available (446 aa)
  0.999
dacA
Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria (264 aa)
              0.591
O172_00065
annotation not available (418 aa)
              0.591
sdhB
annotation not available (232 aa)
     
 
  0.585
ddl
Multifunctional fusion protein; Cell wall formation; Belongs to the MurCDEF family (809 aa)
         
  0.582
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (336 aa)
           
  0.545
talA
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (327 aa)
           
  0.545
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (208 aa)
           
  0.544
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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