STRINGSTRING
fer protein (Chlamydia trachomatis) - STRING interaction network
"fer" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ferannotation not available (91 aa)    
Predicted Functional Partners:
O172_03985
annotation not available (260 aa)
 
 
  0.896
O172_02320
annotation not available (621 aa)
   
          0.717
O172_04400
annotation not available (164 aa)
   
          0.660
atpE
V-type proton ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane (208 aa)
   
        0.658
O172_03685
annotation not available (168 aa)
   
          0.644
CT058
annotation not available (367 aa)
   
        0.627
O172_03460
Cation efflux system protein; Catalyzes the reductive methylation of 2’-deoxyuridine- 5’-monophosphate (dUMP) to 2’-deoxythymidine-5’-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant (529 aa)
   
          0.549
flhA
annotation not available (605 aa)
              0.548
O172_03550
annotation not available (424 aa)
   
          0.544
O172_02105
annotation not available (289 aa)
   
        0.537
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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