STRINGSTRING
sigD protein (Chlamydia trachomatis) - STRING interaction network
"sigD" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sigDannotation not available (253 aa)    
Predicted Functional Partners:
fliF
annotation not available (334 aa)
   
   
  0.972
flhA
annotation not available (605 aa)
 
   
  0.880
sctQ
annotation not available (373 aa)
   
   
  0.854
O172_00340
annotation not available (31 aa)
              0.770
btrW
annotation not available (146 aa)
   
 
  0.731
sctU
annotation not available (360 aa)
 
   
  0.728
rbsU
annotation not available (650 aa)
 
     
  0.679
yscN
annotation not available (434 aa)
 
 
  0.674
rpoB_2
annotation not available (1252 aa)
       
 
  0.669
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (377 aa)
       
 
  0.666
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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