STRINGSTRING
copN protein (Chlamydia trachomatis) - STRING interaction network
"copN" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copNannotation not available (421 aa)    
Predicted Functional Partners:
scc1
annotation not available (146 aa)
         
  0.888
sctU
annotation not available (360 aa)
              0.806
invA
annotation not available (708 aa)
              0.806
malQ
annotation not available (527 aa)
         
  0.781
tarp
annotation not available (1007 aa)
           
  0.636
sigD
annotation not available (253 aa)
           
  0.613
O172_00495
annotation not available (43 aa)
              0.587
CT529
annotation not available (298 aa)
           
  0.522
CT618
annotation not available (266 aa)
           
  0.493
npt1
annotation not available (528 aa)
           
  0.457
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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