STRINGSTRING
yceC protein (Chlamydia trachomatis) - STRING interaction network
"yceC" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yceCannotation not available (303 aa)    
Predicted Functional Partners:
rluB
annotation not available (241 aa)
 
  0.772
der
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis (490 aa)
 
 
  0.717
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (241 aa)
 
   
  0.698
mutY
annotation not available (369 aa)
   
        0.636
pheT
annotation not available (790 aa)
   
   
  0.609
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (334 aa)
 
      0.593
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (267 aa)
 
   
  0.589
O172_00585
annotation not available (251 aa)
   
        0.541
O172_04120
annotation not available (396 aa)
 
 
  0.477
pheS
annotation not available (342 aa)
   
      0.474
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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