STRINGSTRING
incD protein (Chlamydia trachomatis) - STRING interaction network
"incD" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
incDannotation not available (141 aa)    
Predicted Functional Partners:
incF
annotation not available (104 aa)
         
  0.859
incE
annotation not available (132 aa)
         
  0.859
incG
annotation not available (167 aa)
         
  0.800
CT228
annotation not available (196 aa)
           
  0.625
incB
annotation not available (115 aa)
           
  0.619
tarp
annotation not available (1007 aa)
           
  0.546
incC
annotation not available (178 aa)
           
  0.480
O172_00620
annotation not available (486 aa)
              0.449
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (663 aa)
           
  0.418
CT288
annotation not available (563 aa)
           
  0.416
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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