STRINGSTRING
lolE protein (Chlamydia trachomatis) - STRING interaction network
"lolE" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolEannotation not available (503 aa)    
Predicted Functional Partners:
lolD
annotation not available (225 aa)
   
  0.999
O172_01310
annotation not available (792 aa)
 
 
  0.945
pmpD
annotation not available (1530 aa)
   
        0.830
pmpA
annotation not available (975 aa)
   
        0.829
lnt_3
annotation not available (542 aa)
 
   
  0.819
rpmG
annotation not available (52 aa)
              0.804
pal
annotation not available (188 aa)
   
 
  0.786
rpoD
RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (571 aa)
 
   
  0.759
basR
annotation not available (227 aa)
   
   
  0.733
msbA
annotation not available (646 aa)
   
   
  0.720
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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