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rnz protein (Chlamydia trachomatis) - STRING interaction network
"rnz" - Ribonuclease Z in Chlamydia trachomatis
Nodes:
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnzRibonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA; Belongs to the RNase Z family (304 aa)    
Predicted Functional Partners:
O172_04370
annotation not available (120 aa)
         
    0.900
xerC
annotation not available (315 aa)
              0.750
O172_00530
annotation not available (569 aa)
   
        0.703
yjjK
annotation not available (528 aa)
   
        0.563
rsmB
annotation not available (368 aa)
   
        0.547
lon
Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (819 aa)
   
        0.534
O172_01910
annotation not available (700 aa)
              0.521
hisS
annotation not available (428 aa)
     
 
  0.483
O172_01905
annotation not available (566 aa)
   
        0.478
maf
annotation not available (196 aa)
   
        0.478
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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