STRINGSTRING
pmpA protein (Chlamydia trachomatis) - STRING interaction network
"pmpA" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmpAannotation not available (975 aa)    
Predicted Functional Partners:
lolE
annotation not available (503 aa)
   
        0.829
O172_03510
annotation not available (1006 aa)
 
          0.783
O172_01850
annotation not available (509 aa)
   
          0.767
O172_00830
annotation not available (810 aa)
   
          0.726
O172_00620
annotation not available (486 aa)
   
          0.699
O172_02130
annotation not available (335 aa)
   
          0.682
O172_02240
annotation not available (1752 aa)
 
       
0.679
pgaB
annotation not available (243 aa)
   
          0.677
pmpC
annotation not available (1784 aa)
 
     
0.670
O172_03280
annotation not available (200 aa)
   
        0.667
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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