STRINGSTRING
cdsA protein (Chlamydia trachomatis) - STRING interaction network
"cdsA" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsAannotation not available (305 aa)    
Predicted Functional Partners:
plsC
annotation not available (216 aa)
   
 
  0.986
pgsA
annotation not available (213 aa)
   
  0.939
O172_02730
annotation not available (168 aa)
   
  0.939
O172_04615
annotation not available (263 aa)
   
 
  0.932
plsB
annotation not available (333 aa)
   
 
  0.913
O172_04320
annotation not available (253 aa)
   
 
  0.913
uppS
Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (253 aa)
   
        0.912
cmk
annotation not available (216 aa)
   
        0.871
argS
annotation not available (563 aa)
   
        0.843
O172_01490
annotation not available (198 aa)
 
          0.420
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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