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prfB protein (Chlamydia trachomatis) - STRING interaction network
"prfB" - Peptide chain release factor 2 in Chlamydia trachomatis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prfBPeptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (334 aa)    
Predicted Functional Partners:
rplB
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (284 aa)
     
      0.894
O172_02505
annotation not available (167 aa)
              0.890
rpsP
annotation not available (116 aa)
   
      0.882
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (112 aa)
   
 
  0.882
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (107 aa)
   
      0.879
rplK
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors (141 aa)
     
      0.854
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (83 aa)
     
 
  0.841
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (81 aa)
   
      0.826
rpmA
annotation not available (83 aa)
   
      0.810
rplQ
annotation not available (141 aa)
 
      0.801
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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