STRINGSTRING
prgK protein (Chlamydia trachomatis) - STRING interaction network
"prgK" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prgKannotation not available (326 aa)    
Predicted Functional Partners:
sctT
annotation not available (289 aa)
 
   
  0.939
sctS
annotation not available (94 aa)
 
   
  0.902
O172_03075
annotation not available (278 aa)
              0.845
O172_03085
annotation not available (223 aa)
   
   
  0.831
invA
annotation not available (708 aa)
 
   
  0.803
sctQ
annotation not available (373 aa)
   
   
  0.764
fliF
annotation not available (334 aa)
         
  0.694
fliP
annotation not available (306 aa)
 
     
  0.677
O172_03080
annotation not available (64 aa)
              0.593
ompA
Major outer membrane porin, serovar F; In elementary bodies (EBs, the infectious stage, which is able to survive outside the host cell) provides the structural integrity of the outer envelope through disulfide cross-links with the small cysteine-rich protein and the large cysteine-rich periplasmic protein. It has been described in publications as the Sarkosyl-insoluble COMC (Chlamydia outer membrane complex), and serves as the functional equivalent of peptidoglycan (By similarity) (395 aa)
           
  0.586
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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