STRINGSTRING
copB protein (Chlamydia trachomatis) - STRING interaction network
"copB" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copBannotation not available (487 aa)    
Predicted Functional Partners:
scc2
annotation not available (232 aa)
         
  0.822
copD
annotation not available (439 aa)
              0.742
O172_03165
annotation not available (119 aa)
              0.710
lcrH
annotation not available (172 aa)
           
  0.660
CT861
annotation not available (506 aa)
           
  0.660
copN
annotation not available (421 aa)
           
  0.454
murJ
annotation not available (536 aa)
           
  0.412
flhA
annotation not available (605 aa)
           
  0.410
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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