STRINGSTRING
pal protein (Chlamydia trachomatis) - STRING interaction network
"pal" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palannotation not available (188 aa)    
Predicted Functional Partners:
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (431 aa)
 
  0.996
exbB
annotation not available (232 aa)
 
 
 
  0.967
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel (222 aa)
   
 
  0.961
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (81 aa)
   
      0.958
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (219 aa)
     
      0.958
rpsU
annotation not available (58 aa)
     
      0.956
O172_03260
annotation not available (135 aa)
     
 
  0.898
O172_03280
annotation not available (200 aa)
   
      0.869
rpmI
annotation not available (64 aa)
   
      0.851
O172_03265
annotation not available (235 aa)
              0.845
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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