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rpoD protein (Chlamydia trachomatis) - STRING interaction network
"rpoD" - RNA polymerase sigma factor SigA in Chlamydia trachomatis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpoDRNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (571 aa)    
Predicted Functional Partners:
rpoC_1
annotation not available (1396 aa)
 
 
  0.991
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (377 aa)
 
 
  0.991
rpoB_2
annotation not available (1252 aa)
 
 
  0.990
folP
annotation not available (450 aa)
         
  0.876
secA
Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (969 aa)
 
 
  0.862
folX
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin (124 aa)
              0.833
O172_03340
annotation not available (243 aa)
              0.833
dhfR
annotation not available (165 aa)
              0.809
O172_03335
annotation not available (231 aa)
              0.802
kdsD
annotation not available (328 aa)
   
 
  0.801
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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