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rpsT protein (Chlamydia trachomatis) - STRING interaction network
"rpsT" - 30S ribosomal protein S20 in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (102 aa)    
Predicted Functional Partners:
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (89 aa)
   
 
  0.997
rpmE2
annotation not available (108 aa)
   
 
  0.996
rpmA
annotation not available (83 aa)
   
 
  0.996
rpmB
annotation not available (89 aa)
   
 
  0.996
rpsP
annotation not available (116 aa)
   
 
  0.995
rpsI
annotation not available (129 aa)
     
 
  0.995
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (150 aa)
     
 
  0.995
rpmF
annotation not available (59 aa)
   
 
  0.994
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (107 aa)
   
 
  0.991
rpmG
annotation not available (52 aa)
   
 
  0.991
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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