STRINGSTRING
O172_03500 protein (Chlamydia trachomatis) - STRING interaction network
"O172_03500" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
O172_03500annotation not available (336 aa)    
Predicted Functional Partners:
mreB
annotation not available (366 aa)
   
 
  0.885
aspC
annotation not available (400 aa)
              0.869
secG
annotation not available (102 aa)
 
        0.715
O172_00620
annotation not available (486 aa)
   
          0.710
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (715 aa)
 
          0.704
pbpB
annotation not available (1080 aa)
 
 
  0.670
ddl
Multifunctional fusion protein; Cell wall formation; Belongs to the MurCDEF family (809 aa)
 
   
  0.667
O172_04795
annotation not available (601 aa)
   
        0.627
O172_00095
annotation not available (477 aa)
   
          0.608
ftsK_1
annotation not available (799 aa)
   
   
  0.562
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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