STRINGSTRING
lcrH protein (Chlamydia trachomatis) - STRING interaction network
"lcrH" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lcrHannotation not available (172 aa)    
Predicted Functional Partners:
CT861
annotation not available (506 aa)
         
  0.856
CT860
annotation not available (493 aa)
         
  0.851
O172_04820
annotation not available (482 aa)
              0.845
O172_03655
annotation not available (829 aa)
 
 
  0.822
pknD
Serine/threonine-protein kinase PknD; Together with the serine/threonine kinase Pkn1, may play a role in the specific interactions with host proteins during intracellular growth (934 aa)
   
 
  0.665
copB
annotation not available (487 aa)
           
  0.660
O172_03685
annotation not available (168 aa)
   
          0.583
O172_04695
annotation not available (354 aa)
   
          0.581
yscN
annotation not available (434 aa)
   
   
  0.550
prgK
annotation not available (326 aa)
 
        0.534
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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