STRINGSTRING
pmpE protein (Chlamydia trachomatis) - STRING interaction network
"pmpE" - annotation not available in Chlamydia trachomatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmpEannotation not available (964 aa)    
Predicted Functional Partners:
O172_04865
annotation not available (1034 aa)
           
0.845
pmpC
annotation not available (1784 aa)
           
  0.657
ompA
Major outer membrane porin, serovar F; In elementary bodies (EBs, the infectious stage, which is able to survive outside the host cell) provides the structural integrity of the outer envelope through disulfide cross-links with the small cysteine-rich protein and the large cysteine-rich periplasmic protein. It has been described in publications as the Sarkosyl-insoluble COMC (Chlamydia outer membrane complex), and serves as the functional equivalent of peptidoglycan (By similarity) (395 aa)
           
  0.608
O172_04870
annotation not available (1013 aa)
         
0.596
O172_04875
annotation not available (1016 aa)
         
0.541
ompB
annotation not available (340 aa)
           
  0.540
O172_04855
annotation not available (415 aa)
              0.486
yhgN
annotation not available (204 aa)
         
  0.423
fabG
annotation not available (248 aa)
     
   
  0.422
CT143
annotation not available (280 aa)
           
  0.418
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 813
Other names: ATCC VR-571B, C. trachomatis, Chlamydia trachomatis, Chlamydozoon trachomatis, DSM 19440, Rickettsia trachomae, Rickettsia trachomatis, strain A/Har-13
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