STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDJ4PHB domain-containing protein. (348 aa)    
Predicted Functional Partners:
A0A484CMT0
Prohibitin.
   
 
 0.970
A0A484CUK1
Prohibitin.
   
 0.939
A0A484CG88
Ribosomal_S7 domain-containing protein.
  
 
 0.770
A0A484DIL4
Uncharacterized protein.
   
 
 0.757
A0A484CFT1
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.756
A0A484C1A4
MPN domain-containing protein.
   
 
 0.747
A0A484CE79
RBR-type E3 ubiquitin transferase.
    
 
 0.747
A0A484C1G7
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.730
A0A484C626
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.730
A0A484CTA9
Rhomboid domain-containing protein.
  
 0.730
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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