STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABRR1Gamma-aminobutyric acid type A receptor rho1 subunit. (477 aa)    
Predicted Functional Partners:
LOC115568892
Gamma-aminobutyric acid receptor subunit alpha-2-like.
  
0.669
LOC115577283
Gamma-aminobutyric acid receptor subunit alpha-5-like.
  
0.665
gabra5
Gamma-aminobutyric acid type A receptor alpha5 subunit.
  
0.664
LOC115594629
Gamma-aminobutyric acid receptor subunit alpha-3-like.
  
0.663
LOC115566397
Gamma-aminobutyric acid receptor subunit alpha-2-like.
  
0.663
gabrg1
Gamma-aminobutyric acid type A receptor gamma1 subunit.
  
0.663
ENSSAUP00010044266
Gamma-aminobutyric acid (GABA) A receptor, gamma 2.
  
0.662
LOC115593901
Gamma-aminobutyric acid receptor subunit alpha-1-like.
  
0.662
ENSSAUP00010005309
Gamma-aminobutyric acid (GABA) A receptor, alpha 6a.
  
0.658
GABRG3-2
Gamma-aminobutyric acid receptor subunit gamma-3-like.
  
0.658
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.