STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010007633annotation not available (297 aa)    
Predicted Functional Partners:
ENSSAUP00010065018
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
  0.728
rpl21
Ribosomal protein L21.
   
   0.625
LOC115582081
Heme-binding protein 1-like.
    
 0.609
lyrm4
LYR motif containing 4.
    
 0.609
bard1
BRCA1 associated RING domain 1.
    
 0.603
ENSSAUP00010056192
Recombination activating gene 2.
   
 0.602
babam1
BRISC and BRCA1 A complex member 1.
    
 0.560
rpl13a
Ribosomal protein L13a.
   
   0.532
ENSSAUP00010043428
Ribosomal protein L39.
   
   0.523
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.515
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.