STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115584948Galactose-specific lectin nattectin-like. (161 aa)    
Predicted Functional Partners:
ENSSAUP00010036120
Si:dkey-26c10.5.
    
  0.634
ENSSAUP00010065646
Collectin sub-family member 11.
  
  
  0.592
LOC115573064
Collectin-12-like.
    
 
0.549
tyrobp
TYRO protein tyrosine kinase binding protein.
    
  0.544
ENSSAUP00010002177
annotation not available
    
  0.530
ENSSAUP00010023303
Tenascin C.
    
  0.530
LOC115592652
Tenascin-like.
    
  0.530
tnr
Tenascin R.
    
  0.530
tnn
Tenascin N.
    
  0.530
ENSSAUP00010049901
annotation not available
    
  0.509
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.