STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010012506Receptor accessory protein 2. (156 aa)    
Predicted Functional Partners:
ENSSAUP00010036258
Receptor accessory protein 1.
  
 
 
0.731
ENSSAUP00010019773
Receptor accessory protein 3b.
  
 
 
0.605
atl1
Atlastin GTPase 1.
    
 
 0.578
arl6ip1
ADP ribosylation factor like GTPase 6 interacting protein 1.
    
 
 0.576
rab3gap2
RAB3 GTPase activating non-catalytic protein subunit 2.
    
 
 0.556
tubgcp4
Tubulin gamma complex associated protein 4.
      
 0.543
zfyve27
Zinc finger FYVE-type containing 27.
    
 
 0.541
LOC115592062
Receptor expression-enhancing protein 6-like.
  
 
 
0.507
LOC115566342
Receptor expression-enhancing protein 5-like.
  
 
 
0.506
LOC115573201
Reticulophagy regulator 1-like.
    
 
 0.489
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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