STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010039436Complement component 1, r subcomponent. (723 aa)    
Predicted Functional Partners:
serping1
Serpin family G member 1.
  
 0.829
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.784
mst1r
Macrophage stimulating 1 receptor.
    
  0.784
LOC115583471
Macrophage-stimulating protein receptor-like.
    
  0.784
LOC115582832
Complement C3-like.
   
 0.751
LOC115582848
Complement C3-like.
   
 0.751
LOC115576905
Complement C3-like.
   
 0.751
LOC115582874
Complement C3-like.
   
 0.751
LOC115582857
Complement C3-like.
   
 0.751
LOC115567904
Complement C4-like.
   
 0.734
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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