STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhno1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (292 aa)    
Predicted Functional Partners:
ENSSAUP00010057421
annotation not available
    
 0.993
rad1
RAD1 checkpoint DNA exonuclease.
    
  0.975
topbp1
DNA topoisomerase II binding protein 1.
    
 0.947
hus1
HUS1 checkpoint clamp component.
    
 0.917
ENSSAUP00010040517
annotation not available
    
 0.917
rad9b
RAD9 checkpoint clamp component B.
    
 0.900
rad9a
RAD9 checkpoint clamp component A.
    
 0.900
cdca7l
Cell division cycle associated 7 like.
    
 0.850
cdca7
Cell division cycle associated 7.
    
 0.850
CLSPN
Claspin.
     
 0.753
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.