STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115573135Nucleolin-like. (620 aa)    
Predicted Functional Partners:
LOC115594748
Nucleophosmin-like.
   
 
 0.966
eif3a
Eukaryotic translation initiation factor 3 subunit A.
   
 
 0.892
ENSSAUP00010006326
poly(A) specific ribonuclease subunit PAN3.
    
 0.889
pan2
poly(A) specific ribonuclease subunit PAN2.
    
 0.886
ncbp2
Nuclear cap binding protein subunit 2.
   
 0.880
nop58
NOP58 ribonucleoprotein.
   
 0.869
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.866
eif4a2
Eukaryotic translation initiation factor 4A2.
   
 0.853
LOC115589498
Eukaryotic initiation factor 4A-I.
   
 0.853
nop56
NOP56 ribonucleoprotein.
   
 0.820
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.