STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010051744HECT and RLD domain containing E3 ubiquitin protein ligase 4. (1010 aa)    
Predicted Functional Partners:
ENSSAUP00010029879
Tumor protein p53.
    
 0.820
herc3
HECT and RLD domain containing E3 ubiquitin protein ligase 3.
  
  
0.806
ENSSAUP00010016099
annotation not available
  
  
 
0.804
ENSSAUP00010054757
annotation not available
  
  
 
0.776
LOC115593067
Ubiquitin-conjugating enzyme E2 L3-like.
   
 0.741
trip12
Thyroid hormone receptor interactor 12.
   
 
0.721
LOC115581687
Ubiquitin-conjugating enzyme E2 L3.
   
 0.717
ENSSAUP00010001267
TSC complex subunit 2.
    
 0.706
tp63
Tumor protein p63.
    
 0.668
tp73
Tumor protein p73.
    
 0.668
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.