STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010052801RAB, member of RAS oncogene family-like 3. (272 aa)    
Predicted Functional Partners:
grpel1
GrpE like 1, mitochondrial.
  
 
 0.762
LOC115594047
Heat shock 70 kDa protein 4-like.
  
 0.734
hspa4l
Heat shock protein family A (Hsp70) member 4 like.
  
 0.734
LOC115568692
Heat shock 70 kDa protein 4-like.
  
 0.734
LOC115587574
Thioredoxin domain-containing protein 3 homolog.
  
 
 0.733
ENSSAUP00010003342
annotation not available
  
 0.727
hsp90ab1
Heat shock protein 90 alpha family class B member 1.
  
 0.727
ENSSAUP00010056882
TNF receptor-associated protein 1.
  
 0.727
LOC115574290
Heat shock protein HSP 90-alpha.
  
 0.727
tsc1
TSC complex subunit 1.
  
 0.727
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.