STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115586908ADP-ribosylation factor 4-like. (180 aa)    
Predicted Functional Partners:
ENSSAUP00010018110
Intersectin 2b.
    
 0.900
ENSSAUP00010040996
Intersectin 2a.
    
 0.900
ENSSAUP00010003976
Im:7152348.
   
 0.874
copg2
Coatomer protein complex subunit gamma 2.
    
 0.874
itsn1
Intersectin 1.
    
 0.866
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.861
arfgap1
ADP ribosylation factor GTPase activating protein 1.
   
 0.844
ap1g1
Adaptor related protein complex 1 subunit gamma 1.
    
 0.842
copb1
Coatomer protein complex subunit beta 1.
   
 0.839
ap1b1
Adaptor related protein complex 1 subunit beta 1.
   
 0.803
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.