STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115583143Ras association domain-containing protein 1-like. (358 aa)    
Predicted Functional Partners:
rassf5
Ras association domain family member 5.
    
0.946
ENSSAUP00010006039
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.890
LOC115583233
Serine/threonine-protein kinase 3/4-like.
    
 0.890
LOC115583233-2
Serine/threonine-protein kinase 3/4-like.
    
 0.890
mras
Muscle RAS oncogene homolog.
    
 0.855
rras2
RAS related 2.
    
 0.827
LOC115577225
Ras-related protein R-Ras-like.
    
 0.827
daxx
Death domain associated protein.
    
 
 0.781
mdm2
MDM2 proto-oncogene.
   
 0.770
kras
KRAS proto-oncogene, GTPase.
    
 0.758
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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