STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010061879Bicaudal D homolog 2 (Drosophila). (887 aa)    
Predicted Functional Partners:
dctn2
Dynactin subunit 2.
    
 0.912
LOC115589258
Dynactin subunit 1-like.
    
 0.881
ENSSAUP00010040265
Dynactin 1b.
    
 0.881
dync1li2
Dynein cytoplasmic 1 light intermediate chain 2.
    
 0.852
LOC115575360
Cytoplasmic dynein 1 light intermediate chain 1-like.
    
 0.852
LOC115591172
Ras-related protein Rab-6B-like.
    
 0.812
rab41
RAB41, member RAS oncogene family.
    
 0.812
LOC115573112
Ras-related protein Rab-6B-like.
    
 0.812
LOC115594255
Ras-related protein Rab-6A.
    
 0.812
ENSSAUP00010066934
annotation not available
    
 
 0.802
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.