STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115577090Sodium/potassium-transporting ATPase subunit alpha-1. (1064 aa)    
Predicted Functional Partners:
LOC115577122
Sodium/potassium-transporting ATPase subunit beta-233-like.
   
 0.951
LOC115591063
Sodium/potassium-transporting ATPase subunit beta-233-like.
   
 0.951
ATP4B
ATPase H+/K+ transporting subunit beta.
   
 0.936
ENSSAUP00010001079
annotation not available
   
 0.932
ENSSAUP00010043381
ATPase Na+/K+ transporting subunit beta 4.
   
 0.930
LOC115593899
Sodium/potassium-transporting ATPase subunit beta-2-like.
   
 0.929
ENSSAUP00010014480
annotation not available
   
 0.919
ENSSAUP00010046194
annotation not available
  
 
 0.857
ENSSAUP00010046198
annotation not available
  
 
 0.857
LOC115572941
cAMP-dependent protein kinase catalytic subunit beta.
   
 
 0.852
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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