STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9V492_MONBEPredicted protein. (371 aa)    
Predicted Functional Partners:
A9US11_MONBE
Predicted protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.525
A9UQS5_MONBE
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.519
A9V1Q7_MONBE
Predicted protein.
   
 0.500
A9UVV6_MONBE
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.496
A9UTR2_MONBE
Predicted protein.
   
  0.487
bysl
Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits; Belongs to the bystin family.
   
 0.481
A9US62_MONBE
Predicted protein.
   
 0.468
A9VA30_MONBE
Predicted protein.
   
 0.468
A9UNR7_MONBE
Uncharacterized protein.
      
 0.454
A9V3Y9_MONBE
Predicted protein.
   
 0.452
Your Current Organism:
Monosiga brevicollis
NCBI taxonomy Id: 81824
Other names: M. brevicollis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.