STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9VDF2_MONBEPredicted protein. (417 aa)    
Predicted Functional Partners:
A9V054_MONBE
Predicted protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.987
A9URL9_MONBE
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.814
A9V9G0_MONBE
Predicted protein.
   
 
 0.788
A9V9J4_MONBE
Predicted protein.
   
 0.780
A9UZ68_MONBE
Predicted protein.
   
 
 0.748
A9V5S6_MONBE
Predicted protein.
     
 0.708
A9V205_MONBE
Predicted protein.
     
 0.601
A9V4S8_MONBE
Predicted protein.
   
 
 0.592
A9UPF4_MONBE
J domain-containing protein.
   
 
 0.585
A9V3P8_MONBE
Predicted protein.
   
 
 0.573
Your Current Organism:
Monosiga brevicollis
NCBI taxonomy Id: 81824
Other names: M. brevicollis
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