STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GRK8_9BRASTF-B3 domain-containing protein. (273 aa)    
Predicted Functional Partners:
R0FW98_9BRAS
Uncharacterized protein.
    
 
 0.911
R0FBV1_9BRAS
SWIM-type domain-containing protein.
    
 0.819
R0GVQ5_9BRAS
Uncharacterized protein.
      
 0.760
R0FVC1_9BRAS
Uncharacterized protein.
      
 0.728
R0F129_9BRAS
Uncharacterized protein; Belongs to the peptidase S8 family.
    
 0.689
R0H0S1_9BRAS
Uncharacterized protein.
    
 
 0.687
R0HAX1_9BRAS
Uncharacterized protein.
    
 
 0.687
R0HAM0_9BRAS
Uncharacterized protein.
    
 0.565
R0GWS3_9BRAS
Uncharacterized protein.
      
 0.560
R0GDS2_9BRAS
Uncharacterized protein; Belongs to the NPH3 family.
  
     0.476
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.