STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GDP6_9BRASMethionine S-methyltransferase. (1069 aa)    
Predicted Functional Partners:
R0HZ41_9BRAS
Uncharacterized protein.
     
 0.932
R0GGY3_9BRAS
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
  0.900
R0GQU4_9BRAS
Uncharacterized protein.
     
  0.900
R0GR46_9BRAS
Uncharacterized protein.
     
  0.900
R0H3L0_9BRAS
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
  0.900
R0HIH8_9BRAS
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
  0.900
R0I0S5_9BRAS
Uncharacterized protein.
     
  0.900
R0HIZ0_9BRAS
Hcy-binding domain-containing protein.
      
 0.795
R0HGT0_9BRAS
Hcy-binding domain-containing protein.
      
 0.772
R0I8M8_9BRAS
Hcy-binding domain-containing protein.
      
 0.759
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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