STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0F3L1_9BRASUncharacterized protein. (1114 aa)    
Predicted Functional Partners:
R0H8M6_9BRAS
Homeobox domain-containing protein.
  
   
 0.881
R0HGK9_9BRAS
Na_H_Exchanger domain-containing protein.
      
 0.760
R0HRX8_9BRAS
Homeobox domain-containing protein.
      
 0.760
R0I8E9_9BRAS
ZF-HD dimerization-type domain-containing protein.
      
 0.756
R0F3V5_9BRAS
Uncharacterized protein.
      
 0.688
R0G287_9BRAS
Uncharacterized protein.
      
 0.541
R0I641_9BRAS
Uncharacterized protein.
  
     0.520
R0GUK4_9BRAS
C2 NT-type domain-containing protein.
  
     0.501
R0GSF6_9BRAS
Uncharacterized protein.
  
     0.494
R0GE32_9BRAS
Uncharacterized protein.
  
     0.493
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (24%) [HD]