STRINGSTRING
XP_006287211.1 protein (Capsella rubella) - STRING interaction network
"XP_006287211.1" - Uncharacterized protein in Capsella rubella
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_006287211.1Uncharacterized protein; Encoded by transcript CARUB_v10000388m (674 aa)    
Predicted Functional Partners:
XP_006302382.1
Uncharacterized protein; Encoded by transcript CARUB_v10020447m (386 aa)
   
  0.998
XP_006287678.1
Uncharacterized protein; Encoded by transcript CARUB_v10000887m (468 aa)
   
  0.991
XP_006285392.1
Uncharacterized protein; Encoded by transcript CARUB_v10006797m (455 aa)
   
  0.991
XP_006297859.1
Uncharacterized protein; Encoded by transcript CARUB_v10013899m (393 aa)
   
 
  0.988
XP_006284124.1
Cysteine synthase; Encoded by transcript CARUB_v10005256m; Belongs to the cysteine synthase/cystathionine beta- synthase family (322 aa)
   
 
  0.987
XP_006297802.1
Cysteine synthase; Encoded by transcript CARUB_v10013838m; Belongs to the cysteine synthase/cystathionine beta- synthase family (409 aa)
   
 
  0.983
XP_006291669.1
Uncharacterized protein; Encoded by transcript CARUB_v10017827m (272 aa)
   
 
  0.976
XP_006298172.1
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate (313 aa)
   
   
  0.976
XP_006288310.1
Cysteine synthase; Encoded by transcript CARUB_v10001556m; Belongs to the cysteine synthase/cystathionine beta- synthase family (304 aa)
   
 
  0.975
XP_006285367.1
Uncharacterized protein; Encoded by transcript CARUB_v10006758m; Belongs to the precorrin methyltransferase family (350 aa)
 
   
  0.973
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella, Capsella rubella Reut.
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