STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FIW4_9BRASHomeobox domain-containing protein. (367 aa)    
Predicted Functional Partners:
R0GXR2_9BRAS
Uncharacterized protein.
      
 0.772
R0GNJ7_9BRAS
Uncharacterized protein.
      
 0.731
R0FS61_9BRAS
Uncharacterized protein.
  
  
 0.725
R0HF20_9BRAS
Uncharacterized protein.
      
 0.702
R0HPE5_9BRAS
Uncharacterized protein.
      
 0.666
R0G3C3_9BRAS
DYW_deaminase domain-containing protein.
      
 0.627
R0G8N6_9BRAS
Uncharacterized protein.
      
 0.541
R0IML7_9BRAS
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
      
 0.541
R0GFT3_9BRAS
Uncharacterized protein.
      
 0.535
R0GJK4_9BRAS
Uncharacterized protein.
      
 0.521
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (36%) [HD]