STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HH84_9BRASUncharacterized protein. (284 aa)    
Predicted Functional Partners:
R0F0Q8_9BRAS
VEFS-Box domain-containing protein.
      
 0.844
R0GS60_9BRAS
Uncharacterized protein.
      
 0.772
R0IJ37_9BRAS
TF-B3 domain-containing protein.
  
   
 0.753
R0GJQ0_9BRAS
Uncharacterized protein.
      
 0.735
R0HHN1_9BRAS
B box-type domain-containing protein.
      
 0.734
R0HSH9_9BRAS
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
      
 0.702
R0EW31_9BRAS
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.584
R0G851_9BRAS
Uncharacterized protein.
      
 0.581
R0FD64_9BRAS
CXC domain-containing protein.
   
  
 0.570
R0GVH6_9BRAS
RING-CH-type domain-containing protein.
      
 0.568
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.